NII
From Just Solve the File Format Problem
(Difference between revisions)
Dan Tobias (Talk | contribs) |
|||
| (3 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
{{FormatInfo | {{FormatInfo | ||
| − | |subcat= | + | |subcat=Health and Medicine |
|extensions={{ext|nii}}, {{ext|nii.gz}} | |extensions={{ext|nii}}, {{ext|nii.gz}} | ||
| + | |pronom={{PRONOM|fmt/1094}} | ||
}} | }} | ||
| + | :''For the animated image format, see [[Naïve Image Formats]].'' | ||
== General description == | == General description == | ||
| Line 11: | Line 13: | ||
The format is extensively supported and [http://nifti.nimh.nih.gov/ documented by the NIH]. | The format is extensively supported and [http://nifti.nimh.nih.gov/ documented by the NIH]. | ||
| + | |||
| + | == Samples == | ||
| + | * [https://nifti.nimh.nih.gov/nifti-1/data https://nifti.nimh.nih.gov/nifti-1/data] | ||
== Software == | == Software == | ||
| Line 17: | Line 22: | ||
* [http://niftilib.sourceforge.net/ NiftiLib], a full C implementation | * [http://niftilib.sourceforge.net/ NiftiLib], a full C implementation | ||
* [http://nipy.sourceforge.net/nibabel/ NiBabel], a Python neuroimaging file format library | * [http://nipy.sourceforge.net/nibabel/ NiBabel], a Python neuroimaging file format library | ||
| + | |||
| + | [[Category:Scientific Data formats]] | ||
Latest revision as of 22:43, 31 July 2024
- For the animated image format, see Naïve Image Formats.
[edit] General description
NII (or NIfTI) files are probably the most commonly-used format for multi-dimensional neuroimaging data as of this writing (late 2012). NIfTI is a raster format, with files generally containing at least 3-dimensional data: voxels, or pixels with a width, height, and depth. NIfTI files can be up to 7-dimensional: the first four dimensions are defined as 3 spatial dimensions and time, with the other dimensions used for "other stuff" -- though the time dimension is often to encode something other than time.
Most packages also support reading gzip-compressed NIfTI files, which should have the extension .NII.gz.
The format is extensively supported and documented by the NIH.
[edit] Samples
[edit] Software
- NIH Documentation and reference C header
- NiftiLib, a full C implementation
- NiBabel, a Python neuroimaging file format library