http://fileformats.archiveteam.org/api.php?action=feedcontributions&feedformat=atom&user=Hflynn 2026-06-16T14:22:03Z User contributions MediaWiki 1.19.2 http://fileformats.archiveteam.org/wiki/OME-XML 2016-07-15T14:33:59Z

<p>Hflynn: update links, add link to sample files, remove ref to broken online validator</p> <hr /> <div>{{FormatInfo<br /> |formattype=electronic<br /> |subcat=Health and Medicine<br /> |extensions={{ext|ome.xml}}<br /> }}<br /> <br /> == General description ==<br /> This page describes the OME-XML file format for Open Microscopy, defined to make it simple to move microscopy data from one site and user to another. This format is related to [[OME-TIFF]], which was developed from it. The format is described on the [http://www.openmicroscopy.org/site/support/ome-model/ome-xml/ OME-XML page] at the Open Microscopy site.<br /> <br /> == Other information ==<br /> NA<br /> <br /> == Software ==<br /> The file format can be created, read and manipulated using the [http://www.openmicroscopy.org/site/products/bio-formats Bio-Formats Library] and the [http://www.openmicroscopy.org/site/support/omero OMERO Server]. However, almost any software can read the files; you don't need OME software to use OME-XML.<br /> <br /> == Sample files ==<br /> Some sample [http://downloads.openmicroscopy.org/images/OME-XML/ OME-XML files] are available.<br /> <br /> == Identification ==<br /> The file extension is .ome.xml and the MIME Type is xxxxx.<br /> <br /> == References ==<br /> The original paper describing the concept is Goldberg, I. G., Allan, C., Burel, J.-M., Creager, D., Falconi, A., Hochheiser, H., Johnston, J., et al. (2005). The Open Microscopy Environment (OME) Data Model and XML file: open tools for informatics and quantitative analysis in biological imaging. Genome biology, 6(5), R47. doi:10.1186/gb-2005-6-5-r47 .<br /> <br /> [[Category:XML based file formats]]<br /> [[Category:Scientific Data formats]]</div>

Hflynn http://fileformats.archiveteam.org/wiki/OME-TIFF 2016-07-15T14:27:48Z

<p>Hflynn: update links, remove ref to broken online validator</p> <hr /> <div>{{FormatInfo<br /> |formattype=electronic<br /> |subcat=Health and Medicine<br /> |extensions={{ext|ome.tiff}}<br /> }}<br /> <br /> == General description ==<br /> This page describes the OME-TIFF file format, created by the Open Microscopy Environment Consortium to combine the strengths of [[OME-XML]] and [[TIFF]]. The format is described at the [http://www.openmicroscopy.org/site/support/ome-model/ome-tiff/ OME-TIFF page], where there is also a link to the specification.<br /> <br /> == Other information ==<br /> NA<br /> <br /> == Software ==<br /> The file format can be created, read and manipulated using the [http://www.openmicroscopy.org/site/products/bio-formats Bio-Formats Library] and the [http://www.openmicroscopy.org/site/support/omero OMERO Server]. <br /> <br /> == Sample files ==<br /> Some sample [http://www.openmicroscopy.org/site/support/ome-model/ome-tiff/data.html OME-TIFF files] are available.<br /> <br /> == Identification ==<br /> The file extension is .ome.tif or .ome.tiff and the MIME Type is xxxxx.<br /> <br /> == References ==<br /> Linkert, M., Rueden, C. T., Allan, C., Burel, J.-M., Moore, W., Patterson, A., Loranger, B., et al. (2010). Metadata matters: access to image data in the real world. The Journal of cell biology, 189(5), 777–82. doi:10.1083/jcb.201004104<br /> <br /> [[Category:Graphics]]<br /> [[Category:TIFF]]<br /> [[Category:Scientific Data formats]]</div>

Hflynn